The best method to protect the Veeam Backup & Replication configuration is Configuration Backup, which is built-in and enabled by default. The default configuration for Configuration Backup is to occur once a day at 10 AM, writing to the Default Backup Repository. After you create the first Repository, Veeam Backup & Replication will prompt you to ask if you'd like to change the Configuration Backup to use that new Repository.
Review the Configuration Backup settings and consider:
For an added layer of protection, a File Copy job can be set up to duplicate the backup configuration (.bco) files from one location to another.
Processing the Veeam Backup & Replication server with a Backup or Replication job is not advisable. In addition to the potential impacts described in the User Guide, the following should be considered:
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